Content Publishing outside stage

I am creating content for a site http://www.citynfocus.com and I am having an issue with my Flash animation. I have this animation that I want to load in the video window. Now everything works fine with the content that is in there now, but the new content I am creating doesn’t load correctly. Now the code is set to automatically resize the Flash file when it is loaded. So here is my two problems:

  1. When it loads in it doesn’t resize and instead it is so large that I am seeing only the upper left hand corner of the flash file. (and it only does it to new stuff I am creating. All previous content loads fine but also doesn’t have anything off of the stage that rolls in)
  2. The video player also has a enlarge button that is set to open the swf file in a new window according to a variable name. Well when I do this, anything stored off stage is able to also be seen? Is there a way to limit it to only objects on the stage to be able to be seen?

Thanks in advance for any help give
-Mike