Flash / Embed Tool Issue

I have an HTML site for a real estate company that has 3 Flash animations. I created a template in Dreamweaver for the layout and I’m using the Flash / Embed Tool that Kirupa gave away. Now, I made a folder for the properties pages, but when I save or move a page into the folder the animations don’t show up. I tried copying the flashobject.js file into the folder or changing the addresses, but no luck. I know I could create a new layout template and copy the js file into the folder, but then I would have to do a double update if the contents of the templates change.

Is there a workaround so that the same template could be used in different folders and still show the flash animations via one flashobject.js file?